Stem-loop cel-mir-2212

Accession

MI0010962

Description

Caenorhabditis elegans cel-mir-2212 precursor miRNA

Literature search

1 open access papers mention cel-mir-2212
(1 sentences)

Sequence

853 reads, 5 reads per million, 14 experiments

UGGCAGAUCAUAGGCUGACUUUGcaagcauuuuauacaAAGUGGCAUUUGAUAAGCCAUC
((((..((((...(((.((((((.............)))))))))...))))..))))..

Structure

--    AG    UAG   G      caagc 
  UGGC  AUCA   GCU ACUUUG     a
  ||||  ||||   ||| ||||||     u
  ACCG  UAGU   CGG UGAAac     u
CU    AA    UUA   -      auauu 

Annotation confidence Low

Genome context

chrX: 16207829-16207888 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cel-mir-2212

Mature cel-miR-2212-5p

• Accession: MIMAT0011439
• Description: Caenorhabditis elegans cel-miR-2212-5p mature miRNA
• Sequence: 1 - UGGCAGAUCAUAGGCUGACUUUG - 23
• Evidence: experimental ; Illumina [1]

Mature cel-miR-2212-3p

• Accession: MIMAT0011440
• Description: Caenorhabditis elegans cel-miR-2212-3p mature miRNA
• Sequence: 39 - AAGUGGCAUUUGAUAAGCCAUC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19460142
   Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development
   Kato M, de Lencastre A, Pincus Z, Slack FJ
   Genome Biol (2009) 10:R54