Stem-loop cel-mir-2213

Accession

MI0010963

Description

Caenorhabditis elegans cel-mir-2213 precursor miRNA

Sequence

81 reads, 8 reads per million, 14 experiments

UGGCGGACUCUUCACAGUUUGAccucggagaucAAGCUGUAAGAGGACUGCCUAA
.(((((.(((((.(((((((((.((...)).))))))))))))))..)))))...

Structure

--U     -A     C         c  c 
   GGCGG  CUCUU ACAGUUUGA cu  
   |||||  ||||| ||||||||| || g
   CCGUC  GAGAA UGUCGAAcu ga  
AAU     AG     -         a  g 

Annotation confidence Not enough data

Genome context

chrIII: 6968870-6968924 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cel-mir-2213

Mature cel-miR-2213-5p

• Accession: MIMAT0011441
• Description: Caenorhabditis elegans cel-miR-2213-5p mature miRNA
• Sequence: 1 - UGGCGGACUCUUCACAGUUUGA - 22
• Evidence: experimental ; Illumina [1]

Mature cel-miR-2213-3p

• Accession: MIMAT0011442
• Description: Caenorhabditis elegans cel-miR-2213-3p mature miRNA
• Sequence: 34 - AAGCUGUAAGAGGACUGCCUAA - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19460142
   Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development
   Kato M, de Lencastre A, Pincus Z, Slack FJ
   Genome Biol (2009) 10:R54