Stem-loop cel-mir-2217a

Accession

MI0010968

Description

Caenorhabditis elegans cel-mir-2217a precursor miRNA mir-2217

Gene
family

RF03369; mir-2217

Sequence

125 reads, 4 reads per million, 11 experiments

CAGAGUGGGCAGUCGGUGUCGAUCuacaucauucgcaggUCGACCCUUGUGCCUGUUUCGGU
..(((.(((((...((.((((((((.(.......).))))))))))...)))))..)))...

Structure

-CA   -U     GUC  U        a au 
   GAG  GGGCA   GG GUCGAUCu c  c
   |||  |||||   || |||||||| |  a
   CUU  UCCGU   CC CAGCUgga g  u
UGG   UG     GUU  -        c cu 

Annotation confidence Not enough data

Genome context

chrIV: 5280075-5280136 [-]

Mature cel-miR-2217a-5p

• Accession: MIMAT0011451
• Description: Caenorhabditis elegans cel-miR-2217a-5p mature miRNA
• Sequence: 1 - CAGAGUGGGCAGUCGGUGUCGAUC - 24
• Evidence: experimental ; Illumina [1]

Mature cel-miR-2217a-3p

• Accession: MIMAT0011452
• Description: Caenorhabditis elegans cel-miR-2217a-3p mature miRNA
• Sequence: 40 - UCGACCCUUGUGCCUGUUUCGGU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19460142
   Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development
   Kato M, de Lencastre A, Pincus Z, Slack FJ
   Genome Biol (2009) 10:R54