Stem-loop cel-mir-2218a

Accession

MI0010970

Description

Caenorhabditis elegans cel-mir-2218a precursor miRNA

Sequence

21 reads, 1 reads per million, 7 experiments

CAAACUACAAGUUUUAAGCCUCAccaaaaguugggugAGGCCAGAAUAGUGUAGUUUGUA
(((((((((...(((..((((((((........))))))))..)))...)))))))))..

Structure

--         AGU   AA        aaa 
  CAAACUACA   UUU  GCCUCAcc   a
  |||||||||   |||  ||||||||    
  GUUUGAUGU   AAG  CGGAgugg   g
AU         GAU   AC        guu 

Annotation confidence Not enough data

Genome context

chrI: 13812596-13812655 [+]

Mature cel-miR-2218a-5p

• Accession: MIMAT0011455
• Description: Caenorhabditis elegans cel-miR-2218a-5p mature miRNA
• Sequence: 1 - CAAACUACAAGUUUUAAGCCUCA - 23
• Evidence: experimental ; Illumina [1]

Mature cel-miR-2218a-3p

• Accession: MIMAT0011456
• Description: Caenorhabditis elegans cel-miR-2218a-3p mature miRNA
• Sequence: 38 - AGGCCAGAAUAGUGUAGUUUGUA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19460142
   Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development
   Kato M, de Lencastre A, Pincus Z, Slack FJ
   Genome Biol (2009) 10:R54