Stem-loop cel-mir-2221

Accession

MI0010974

Description

Caenorhabditis elegans cel-mir-2221 precursor miRNA

Sequence

240 reads, 1.0 reads per million, 54 experiments

uacauuuauucuuacuguccucgaauacaaacUGGCGGUUUGCAUUCACUUACAuuuauaagacaaaaaugCAAGUGAUACCAGACCGCUAGUuuguaaaagggauaauuuuauguga
...............((((((....(((((((((((((((((...((((((.(((((.........))))).))))))...)))))))))))))))))...))))))...........

Structure

uacauuuauucuuac      cgaa                 CAU      A     aua 
               uguccu    uacaaacUGGCGGUUUG   UCACUU CAuuu   a
               ||||||    |||||||||||||||||   |||||| |||||   g
               auaggg    auguuUGAUCGCCAGAC   AGUGAA guaaa   a
----aguguauuuua      -aaa                 CAU      C     aac 

Annotation confidence High

Genome context

chrX: 1390847-1390964 [+]

Mature cel-miR-2221-5p

• Accession: MIMAT0053609
• Description: Caenorhabditis elegans cel-miR-2221-5p mature miRNA
• Sequence: 33 - UGGCGGUUUGCAUUCACUUACA - 54
• Evidence: experimental ; 454 [1]

Mature cel-miR-2221-3p

• Accession: MIMAT0011463
• Description: Caenorhabditis elegans cel-miR-2221-3p mature miRNA
• Sequence: 72 - CAAGUGAUACCAGACCGCUAGU - 93
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074