Accession
MI0010976
Description
Caenorhabditis briggsae
cbr-mir-238 precursor miRNA
Sequence
24829
reads,
3471.0
reads per million, 3 experiments
uucuucuuauccucaugaauaugacuguuUGGGUGUCCUUGGAUGUAAAAAGCUauaaaucuguuaagauugcUUUGUACUCCGAUGCCAUCCACauggucugacgacaagaaga
.(((((((.((.(((.......((((((.((((((.(.(((((.(((.(((((....(((((....)))))))))).)))))))).).)))))).))))))))).)).)))))))
.(((((((.((.(((.......((((((.((((((.(.(((((.(((.(((((....(((((....)))))))))).)))))))).).)))))).))))))))).)).)))))))
Structure
u a c ugaauau u U C U A Uaua g ucuucuu uc uca gacugu UGGGUG C UUGGA GUA AAAGC aaucu u ||||||| || ||| |||||| |||||| | ||||| ||| ||||| ||||| agaagaa ag agu cuggua ACCUAC G AGCCU CAU UUUcg uuaga u - c c ------- C C U - G ---- a
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chrIII: 14445069-14445183 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cbr-mir-238
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cbr-miR-238-5p
| Accession | MIMAT0053569 |
| Description | Caenorhabditis briggsae cbr-miR-238-5p mature miRNA |
| Sequence | 30 - UGGGUGUCCUUGGAUGUAAAAAGCU - 54 |
| Evidence |
experimental
454 [1] |
Mature cbr-miR-238-3p
| Accession | MIMAT0011465 |
| Description | Caenorhabditis briggsae cbr-miR-238-3p mature miRNA |
| Sequence | 74 - UUUGUACUCCGAUGCCAUCCAC - 95 |
| Evidence |
experimental
454 [1] |
References
|
