Stem-loop cbr-mir-76

Accession

MI0010977

Description

Caenorhabditis briggsae cbr-mir-76 precursor miRNA

Sequence

520 reads, 49.0 reads per million, 3 experiments

aucccucauucgccaauuAGGACUUCACAACAUGCGAAUAccaccacuucuauggauaUUCGUUGUUGAUGAAGUCUUAAuggacgucugcggggu
(((((.((..(((((.((((((((((((((((.((((((((((.........))).)))))))))))).)))))))))))))).))..)).)))))

Structure

     u  uu  -   a           -     U       -   cca 
auccc ca  cg cca uuAGGACUUCA CAACA GCGAAUA cca   c
||||| ||  || ||| ||||||||||| ||||| ||||||| |||   u
ugggg gu  gc ggu AAUUCUGAAGU GUUGU UGCUUau ggu   u
     c  cu  a   -           A     -       a   auc 

Annotation confidence High

Genome context

chrIII: 2936452-2936547 [-]

Mature cbr-miR-76-5p

• Accession: MIMAT0053570
• Description: Caenorhabditis briggsae cbr-miR-76-5p mature miRNA
• Sequence: 19 - AGGACUUCACAACAUGCGAAUA - 40
• Evidence: experimental ; 454 [1]

Mature cbr-miR-76-3p

• Accession: MIMAT0011466
• Description: Caenorhabditis briggsae cbr-miR-76-3p mature miRNA
• Sequence: 59 - UUCGUUGUUGAUGAAGUCUUAA - 80
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074