Accession
MI0010985
Description
Caenorhabditis briggsae
cbr-mir-54a precursor miRNA
Sequence
caggacgucuaagccgauccuuggcUGGGAUAUGAGCAAACGUGUACacgauacuuauucccugUACCCGUAUUCUCAUAUCUGAGCcaaggaucgucgcaaaaggcggugcuuccug
((((((((((..((((((((((((((.(((((((((...(((.(((((.((.......))..))))).)))...))))))))).))))))))))))..))...))))).....)))))
((((((((((..((((((((((((((.(((((((((...(((.(((((.((.......))..))))).)))...))))))))).))))))))))))..))...))))).....)))))
Structure
----- -aa -- G CAA U -c ua
cagga cgucu gc cgauccuuggcU GGAUAUGAG ACG GUACa ga c
||||| ||||| || |||||||||||| ||||||||| ||| ||||| || u
guccu gcgga cg gcuaggaacCGA UCUAUACUC UGC CAUgu cu u
ucgug aaa cu G UUA C cc ua
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chrX: 16963746-16963863 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from cbr-mir-54a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cbr-miR-54a-5p
| Accession | MIMAT0011477 |
| Description | Caenorhabditis briggsae cbr-miR-54a-5p mature miRNA |
| Sequence | 26 - UGGGAUAUGAGCAAACGUGUAC - 47 |
| Evidence |
experimental
454 [1] |
Mature cbr-miR-54a-3p
| Accession | MIMAT0011478 |
| Description | Caenorhabditis briggsae cbr-miR-54a-3p mature miRNA |
| Sequence | 65 - UACCCGUAUUCUCAUAUCUGAGC - 87 |
| Evidence |
experimental
454 [1] |
References
|
