Accession
MI0011000
Description
Caenorhabditis briggsae
cbr-mir-35b-12 precursor miRNA
Sequence
222296
reads,
18700.0
reads per million, 3 experiments
aauggucugggucggaccucCGCUGUUUUUCUCCGCGGUGAUAcuccaaagaaagucguuaUCACCGGGUGAAAACUGGUAGAGguccgauucagucggaccau
.(((((((((((((((((((.((((.(((((.((.((((((((................)))))))))).))))).)))).))))))))))....)))))))))
.(((((((((((((((((((.((((.(((((.((.((((((((................)))))))))).))))).)))).))))))))))....)))))))))
Structure
a ---- C U U G cuccaaa auggucugg gucggaccuc GCUG UUUUC CC CGGUGAUA g ||||||||| |||||||||| |||| ||||| || |||||||| uaccaggcu uagccugGAG UGGU AAAAG GG GCCACUau a - gacu A C U - ugcugaa
Annotation confidence
High
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Genome context
chrX: 15373627-15373730 [+]
Clustered miRNAs
20 other miRNAs are < 10 kb from cbr-mir-35b-12
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cbr-miR-35b-5p
| Accession | MIMAT0053575 |
| Description | Caenorhabditis briggsae cbr-miR-35b-5p mature miRNA |
| Sequence | 21 - CGCUGUUUUUCUCCGCGGUGAUA - 43 |
| Evidence |
experimental
454 [1] |
Mature cbr-miR-35b-3p
| Accession | MIMAT0011483 |
| Description | Caenorhabditis briggsae cbr-miR-35b-3p mature miRNA |
| Sequence | 62 - UCACCGGGUGAAAACUGGUAGAG - 84 |
| Evidence |
experimental
454 [1] |
References
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