Stem-loop cbr-mir-2223

Accession

MI0011010

Description

Caenorhabditis briggsae cbr-mir-2223 precursor miRNA

Sequence

uccaauauuuucggcaauuUUUGUACUCAUGUAAGGUGACaaagauagcaaauuugaccguauccacgucaauuaucaugcaucuucaucagugcaagaauggccuuuuuugga
(((((.......(((.(((((((((((.(((.((((((.((..(((((.....(((((.((....)))))))))))).))))))))))).))))))))))).)))....)))))

Structure

     uauuuuc   a           C   U      A  aa     caaau     c  a 
uccaa       ggc auuUUUGUACU AUG AAGGUG Ca  gauag     uugac gu u
|||||       ||| ||||||||||| ||| |||||| ||  |||||     ||||| ||  
agguu       ccg uaagaacguga uac uucuac gu  cuauu     aacug ca c
     ---uuuu   g           c   -      -  -a     -----     -  c 

Annotation confidence Low

Genome context

chrIV: 15568442-15568555 [-]

Mature cbr-miR-2223

• Accession: MIMAT0011492
• Description: Caenorhabditis briggsae cbr-miR-2223 mature miRNA
• Sequence: 20 - UUUGUACUCAUGUAAGGUGAC - 40
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074