Accession
MI0011014
Description
Caenorhabditis briggsae
cbr-mir-54d precursor miRNA
Sequence
aaagcgcuaggugauccuugacuaggauauaaaaagaacguguguacaugaauccagugaauacuugUACCCGUAUUUUUAUAUCCGAGccaaggauugccguugaucguuuuc
((((((...(((((((((((.((.(((((((((((..(((.(.(((((.................))))))))).))))))))))).)).)))))))))))......)))))).
((((((...(((((((((((.((.(((((((((((..(((.(.(((((.................))))))))).))))))))))).)).)))))))))))......)))))).
Structure
- ---cua a a ga u u ugaaucc aaagcg ggugauccuug cu ggauauaaaaa acg g guaca a |||||| ||||||||||| || ||||||||||| ||| | ||||| g uuuugc ccguuaggaac GA CCUAUAUUUUU UGC C CAUgu u c uaguug c G -A - - ucauaag
Annotation confidence
Low
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Genome context
chrX: 16964062-16964175 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from cbr-mir-54d
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cbr-miR-54d
| Accession | MIMAT0011496 |
| Description | Caenorhabditis briggsae cbr-miR-54d mature miRNA |
| Sequence | 68 - UACCCGUAUUUUUAUAUCCGAG - 89 |
| Evidence |
experimental
454 [1] |
References
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