Stem-loop crm-mir-786

Accession

MI0011018

Description

Caenorhabditis remanei crm-mir-786 precursor miRNA

Gene family

MIPF0000363; mir-786

Sequence

aguaaguuucgggacaagucccaauagagucucggacagggcauuuacauacaagauaaauuugUAAUGCCCUUGCUGAGAUUCCAUugguaucacguuccacauuuau
.((((((...(((((..((.(((((.(((((((((..((((((((.(((.............)))))))))))..))))))))).))))).))...)))))..))))))

Structure

a      uuc     -aa  c     a         ac        u   uacaa 
 guaagu   gggac   gu ccaau gagucucgg  agggcauu aca     g
 ||||||   |||||   || ||||| |||||||||  |||||||| |||     a
 uauuua   ccuug   ua gguUA CUUAGAGUC  UCCCGUAA Ugu     u
-      -ca     cac  u     C         GU        -   uuaaa 

Annotation confidence Not enough data

Genome context

Crem_Contig0: 181392-181500 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from crm-mir-786

Mature crm-miR-786

• Accession: MIMAT0011503
• Description: Caenorhabditis remanei crm-miR-786 mature miRNA
• Sequence: 65 - UAAUGCCCUUGCUGAGAUUCCAU - 87
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074