Stem-loop crm-mir-49

Accession

MI0011023

Description

Caenorhabditis remanei crm-mir-49 precursor miRNA

Gene family

MIPF0000237; mir-49

Sequence

guaaguuuagaacaaucuaccgauccgcaguuucuuaugaugugcuccgagccaacauguguucgAAGCACCACGAGAAGCUGCAGauggaggaguuuguuccauuuugc
(((((....((((((.((.((.(((.((((((((((.((..(((((.(((((((...)).))))).))))))).)))))))))).))).).).)).))))))...)))))

Structure

     uuua      u  a - g   c          a  au     c     -  a 
guaag    gaacaa cu c c auc gcaguuucuu ug  gugcu cgagc ca  
|||||    |||||| || | | ||| |||||||||| ||  ||||| ||||| || c
cguuu    cuuguu ga g g uaG CGUCGAAGAG AC  CACGA gcuug gu  
     -uac      u  g a g   A          C  --     A     u  a 

Annotation confidence Not enough data

Genome context

Crem_Contig50: 190582-190691 [-]

Mature crm-miR-49

• Accession: MIMAT0011508
• Description: Caenorhabditis remanei crm-miR-49 mature miRNA
• Sequence: 66 - AAGCACCACGAGAAGCUGCAG - 86
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074