Stem-loop crm-mir-35e-1

Accession

MI0011029

Description

Caenorhabditis remanei crm-mir-35e-1 precursor miRNA

Gene family

MIPF0000096; mir-36

Sequence

augacgggaaccgugcugguuucgaacucgguaauagaccagaagaaagcuaUCACCGGGUGGAAACUGGUACGgguccccgagucgu
(((((((((.(((((((((((((..(((((((.((((............)))).))))))).))))))))))))).))))...)))))

Structure

     ---    a             ga       a    accag 
augac   ggga ccgugcugguuuc  acucggu auag     a
|||||   |||| |||||||||||||  ||||||| ||||      
ugcug   cccu gGCAUGGUCAAAG  UGGGCCA Uauc     a
     agc    g             -G       C    gaaag 

Annotation confidence Not enough data

Genome context

Crem_Contig93: 222856-222943 [-]

Clustered miRNAs

15 other miRNAs are < 10 kb from crm-mir-35e-1

Mature crm-miR-35e

• Accession: MIMAT0011513
• Description: Caenorhabditis remanei crm-miR-35e mature miRNA
• Sequence: 53 - UCACCGGGUGGAAACUGGUACG - 74
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074