Stem-loop crm-let-7

Accession

MI0011037

Description

Caenorhabditis remanei crm-let-7 precursor miRNA

Gene family

MIPF0000002; let-7

Literature search

3 open access papers mention crm-let-7
(9 sentences)

Sequence

gcggccggucaacacugugcgucuggUGAGGUAGUAGGUUGUAUAGUUuagaaucuuaccuuggugaacuaugcaaguuucuaccucaccagauacagaaucuucucagcugc
(((((.((......((((..((((((((((((((.((.((((((((((((..(........)..)))))))))))).)).))))))))))))))))))......))..)))))

Structure

     -c  ucaaca    gc              U  G            ga ucu 
gcggc  gg      cugu  gucuggUGAGGUAG AG UUGUAUAGUUua  a   u
|||||  ||      ||||  |||||||||||||| || ||||||||||||  |    
cgucg  uc      gaca  uagaccacuccauc uu aacguaucaagu  u   a
     ac  uucuaa    --              u  g            gg ucc 

Annotation confidence Not enough data

Genome context

Crem_Contig27: 289521-289633 [-]

Mature crm-let-7

• Accession: MIMAT0011519
• Description: Caenorhabditis remanei crm-let-7 mature miRNA
• Sequence: 27 - UGAGGUAGUAGGUUGUAUAGUU - 48
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074