Stem-loop crm-mir-76

Accession

MI0011043

Description

Caenorhabditis remanei crm-mir-76 precursor miRNA

Sequence

11990 reads, 101.0 reads per million, 9 experiments

cccguccaccuuuuAGGACUUCACGACAAUCGAAUAccuuccacacacuggauaUUCGUUGUUGAUGAAGUCUUaaugggugucuugaaucgggg
(((((((((((.(((((((((((((((((.((((((...((((.....)))))))))))))))).))))))))))).)))))....))..)))).

Structure

-    --  ----     u           -      U      ccu    c 
 cccg  uc    caccu uuAGGACUUCA CGACAA CGAAUA   ucca a
 ||||  ||    ||||| ||||||||||| |||||| ||||||   |||| c
 gggc  ag    guggg aaUUCUGAAGU GUUGUU GCUUau   aggu a
g    ua  uucu     u           A      -      ---    c 

Annotation confidence High

Genome context

Crem_Contig79: 187887-187981 [-]

Mature crm-miR-76-5p

• Accession: MIMAT0056847
• Description: Caenorhabditis remanei crm-miR-76-5p mature miRNA
• Sequence: 15 - AGGACUUCACGACAAUCGAAUA - 36
• Evidence: experimental ; 454 [1]

Mature crm-miR-76-3p

• Accession: MIMAT0011525
• Description: Caenorhabditis remanei crm-miR-76-3p mature miRNA
• Sequence: 55 - UUCGUUGUUGAUGAAGUCUU - 74
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074