Stem-loop crm-mir-61

Accession

MI0011044

Description

Caenorhabditis remanei crm-mir-61 precursor miRNA

Gene family

MIPF0000297; mir-61

Sequence

gcguaauaucggucuuccgaguugggucacggcgcuuaguccuuccgacauauggcaaUGACUAGAACCUUGGCUCAGCucgggacuccgaugagca
..((..((((((..(((((((((((((((.((..((.((((.((((.......)).)).))))))..)).)))))))))))))))..)))))).)).

Structure

gc  aa      uc               c  cg  u    c  -  ga 
  gu  uaucgg  uuccgaguuggguca gg  cu aguc uu cc  c
  ||  ||||||  ||||||||||||||| ||  || |||| || ||  a
  cg  guagcc  agggcuCGACUCGGU CC  GA UCAG aa gg  u
-a  -a      uc               U  AA  -    U  c  ua 

Annotation confidence Not enough data

Genome context

Crem_Contig5: 484744-484840 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from crm-mir-61

Mature crm-miR-61

• Accession: MIMAT0011526
• Description: Caenorhabditis remanei crm-miR-61 mature miRNA
• Sequence: 59 - UGACUAGAACCUUGGCUCAGC - 79
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074