Stem-loop crm-mir-70

Accession

MI0011046

Description

Caenorhabditis remanei crm-mir-70 precursor miRNA

Sequence

229631 reads, 2186.0 reads per million, 9 experiments

augaacgaggagaacagcuauAGGAAUACCGUUGAUGCAUUACAcuaaacauuugaaagaugUAAUACGUCAUUUGGUGUUCCUAUaguuacccguucaa
.((((((.((.....((((((((((((((((.(((((.((((((((...........)).)))))).)))))..)))))))))))))))).)))))))).

Structure

a      a  agaac                -U     C      -  aaac 
 ugaacg gg     agcuauAGGAAUACCG  UGAUG AUUACA cu    a
 |||||| ||     ||||||||||||||||  ||||| |||||| ||    u
 acuugc cc     uugaUAUCCUUGUGGU  ACUGC UAAUgu ga    u
a      -  ----a                UU     A      a  aagu 

Annotation confidence High

Genome context

Crem_Contig8: 1876810-1876909 [-]

Mature crm-miR-70-5p

• Accession: MIMAT0056849
• Description: Caenorhabditis remanei crm-miR-70-5p mature miRNA
• Sequence: 22 - AGGAAUACCGUUGAUGCAUUACA - 44
• Evidence: experimental ; 454 [1]

Mature crm-miR-70-3p

• Accession: MIMAT0011528
• Description: Caenorhabditis remanei crm-miR-70-3p mature miRNA
• Sequence: 63 - UAAUACGUCAUUUGGUGUUCCUAU - 86
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074