Stem-loop crm-mir-790-2

Accession

MI0011062

Description

Caenorhabditis remanei crm-mir-790-2 precursor miRNA

Sequence

uucaaaucaaggucccuuuugacugCUUGGCACUCGCGAACACCGCGaucuuaucagauaaaucgcggaguuagccgguggcaaccaggcgaauguuugagacucacuuuuugaa
.(((((....((((((.((((.(((.(((.((((.((.(((.(((((((.((((...))))))))))).))).)).)))).))).))).)))).)...).)))).....))))).

Structure

u     -ucaa    - --- u    a   C   G    C  G   A       c    c 
 ucaaa     gguc c   c uuug cug UUG CACU GC AAC CCGCGau uuau  
 |||||     |||| |   | |||| ||| ||| |||| || ||| ||||||| |||| a
 aguuu     ucag g   g aagc gac aac gugg cg uug ggcgcua aaua  
a     uucac    a uuu u    g   c   g    c  a   a       -    g 

Annotation confidence Low

Genome context

Crem_Contig1872: 4545-4659 [+]

Mature crm-miR-790

• Accession: MIMAT0011543
• Description: Caenorhabditis remanei crm-miR-790 mature miRNA
• Sequence: 26 - CUUGGCACUCGCGAACACCGCG - 47
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074