Stem-loop crm-mir-236

Accession

MI0011065

Description

Caenorhabditis remanei crm-mir-236 precursor miRNA

Literature search

1 open access papers mention crm-mir-236
(1 sentences)

Sequence

ucuuuggugaccgauguccagcgucuuaccuguucaauauuuagacugauuagcucaugagaucUAAUACUGUCAGGUAAUGACGCUggauuaucuugucauuuauga
((...((((((.((((((((((((((((((((..((.((((.(((((.((......)).)).))))))).)).))))))).))))))))).))))..))))))...))

Structure

  uuu      -c    -         -       uu  a    u   -  g  ua 
uc   ggugac  gaug uccagcguc uuaccug  ca uauu aga cu au  g
||   ||||||  |||| ||||||||| |||||||  || |||| ||| || ||   
ag   uuacug  cuau aggUCGCAG AAUGGAC  GU AUAA Ucu ga ua  c
  uau      uu    u         U       -U  C    -   a  g  cu 

Annotation confidence Low

Genome context

Crem_Contig6: 993548-993655 [+]

Mature crm-miR-236

• Accession: MIMAT0011546
• Description: Caenorhabditis remanei crm-miR-236 mature miRNA
• Sequence: 65 - UAAUACUGUCAGGUAAUGACGCU - 87
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074