Accession
MI0011070
Description
Caenorhabditis remanei
crm-mir-55 precursor miRNA
Sequence
agaguccagacucggaaagucgcaugggacuCGGCAGAAGCACUUGGGGUAUacuucacagaguaacuaUACCCGUAUUUGUUUCUGCUGAGccccugacaccaguucgguacuu
.((((((.((((.((...((((...(((.(((((((((((((..((((((((((((....)))))....))))).))..)))))))))))))))).)))).)))))).)).))))
.((((((.((((.((...((((...(((.(((((((((((((..((((((((((((....)))))....))))).))..)))))))))))))))).)))).)))))).)).))))
Structure
a - a c aaa cau a CU - ---- c gagu cc gacu gg gucg ggg cuCGGCAGAAGCA UG GGGUA Uacuu a |||| || |||| || |||| ||| ||||||||||||| || ||||| ||||| uuca gg uuga cc cagu ccc GAGUCGUCUUUGU AU CCCAU augag c - u c - --a --c - UU G auca a
Annotation confidence
Not enough data
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Genome context
Crem_Contig43: 489184-489298 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from crm-mir-55
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature crm-miR-55-5p
| Accession | MIMAT0011551 |
| Description | Caenorhabditis remanei crm-miR-55-5p mature miRNA |
| Sequence | 32 - CGGCAGAAGCACUUGGGGUAU - 52 |
| Evidence |
experimental
454 [1] |
Mature crm-miR-55-3p
| Accession | MIMAT0011552 |
| Description | Caenorhabditis remanei crm-miR-55-3p mature miRNA |
| Sequence | 70 - UACCCGUAUUUGUUUCUGCUGAG - 92 |
| Evidence |
experimental
454 [1] |
References
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