Stem-loop crm-mir-237

Accession

MI0011071

Description

Caenorhabditis remanei crm-mir-237 precursor miRNA

Gene family

MIPF0000904; mir-237

Sequence

guauuccccaguuaccgucuuugguggUCCCUGAGAAUGCUCUGACUGCUuucgaaguacacgcagCAGUCGAGUAUCCUUAGGAACCaguaaauuacgguucuuuuuugaauacc
((((((.......(((((.((((.((((.((((((.((((((.(((((((..((.......)).))))))))))))).)))))).)))).))))..)))))........)))))).

Structure

-      -cccaguu     -c    g    C      A      U       uu  aa 
 guauuc        accgu  uuug uggU CCUGAG AUGCUC GACUGCU  cg  g
 ||||||        |||||  |||| |||| |||||| |||||| |||||||  ||  u
 cauaag        uggca  aaau aCCA GGAUUC UAUGAG CUGACga  gc  a
c      uuuuuucu     uu    g    A      C      -       -c  ac 

Annotation confidence Not enough data

Genome context

Crem_Contig43: 596094-596209 [+]

Mature crm-miR-237-5p

• Accession: MIMAT0011553
• Description: Caenorhabditis remanei crm-miR-237-5p mature miRNA
• Sequence: 28 - UCCCUGAGAAUGCUCUGACUGCU - 50
• Evidence: experimental ; 454 [1]

Mature crm-miR-237-3p

• Accession: MIMAT0011554
• Description: Caenorhabditis remanei crm-miR-237-3p mature miRNA
• Sequence: 67 - CAGUCGAGUAUCCUUAGGAACC - 88
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074