Accession
MI0011076
Description
Caenorhabditis remanei
crm-mir-48 precursor miRNA
Sequence
cauaccggauguUGAGGUAGGCUCAGUAGAUGCGaucagaguugugccucaggcguuccucACAUCUUCUUGCCUAACUCGCCuuccuuuaugu
((((..(((.(.((((.(((((..((.(((((.((...(((...((((...))))))).)).))))).)).))))).)))).).)))..)))).
((((..(((.(.((((.(((((..((.(((((.((...(((...((((...))))))).)).))))).)).))))).)))).).)))..)))).
Structure
- cc u u G UC U C uca uug u caua gga g UGAG UAGGC AG AGAUG Ga gag ugcc |||| ||| | |||| ||||| || ||||| || ||| |||| c guau ccu C GCUC AUCCG UC UCUAC cu cuu gcgg u uu u C A -U U A --c --- a
Annotation confidence
Low
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Genome context
Crem_Contig8: 84279-84372 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from crm-mir-48
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature crm-miR-48-5p
| Accession | MIMAT0011563 |
| Description | Caenorhabditis remanei crm-miR-48-5p mature miRNA |
| Sequence | 13 - UGAGGUAGGCUCAGUAGAUGCG - 34 |
| Evidence |
experimental
454 [1] |
Mature crm-miR-48-3p
| Accession | MIMAT0011564 |
| Description | Caenorhabditis remanei crm-miR-48-3p mature miRNA |
| Sequence | 62 - ACAUCUUCUUGCCUAACUCGCC - 83 |
| Evidence |
experimental
454 [1] |
References
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