Stem-loop crm-mir-87

Accession

MI0011086

Description

Caenorhabditis remanei crm-mir-87 precursor miRNA

Gene family

MIPF0000152; mir-87

Sequence

cagguugugccuuccggcCGCCUGACACUUUCGUCUCAACCUcgcugucugauauagucguagGUGAGCAAAGUUUCAGGUGUGCcggaacacauccu
.(((.((((..((((((((((((((.(((((.(.((((.(((((((((.....)))).)).))))))))))))).))))))).))))))))))).)))

Structure

c   u    cc       -       C     C U    A   -  -    c 
 agg ugug  uuccggc CGCCUGA ACUUU G CUCA CCU cg cugu u
 ||| ||||  ||||||| ||||||| ||||| | |||| ||| || |||| g
 ucc acac  aaggcCG GUGGACU UGAAA C GAGU Gga gc gaua a
-   u    --       U       U     - -    -   u  u    u 

Annotation confidence Not enough data

Genome context

Crem_Contig5: 734294-734391 [-]

Mature crm-miR-87-5p

• Accession: MIMAT0011581
• Description: Caenorhabditis remanei crm-miR-87-5p mature miRNA
• Sequence: 19 - CGCCUGACACUUUCGUCUCAACCU - 42
• Evidence: experimental ; 454 [1]

Mature crm-miR-87-3p

• Accession: MIMAT0011582
• Description: Caenorhabditis remanei crm-miR-87-3p mature miRNA
• Sequence: 64 - GUGAGCAAAGUUUCAGGUGUGC - 85
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074