Stem-loop crm-mir-46

Accession

MI0011094

Description

Caenorhabditis remanei crm-mir-46 precursor miRNA

Gene family

MIPF0000087; mir-46

Sequence

aaccgaauaagaggagguaaagcugAAGAGAGCCGUCUAUUGACAGUucguuucuauacuuauguacUGUCAUGGAGUCGCUCUCUUCagaugauccuuucaagguuu
((((.....((((((.......(((((((((((..(((((.((((((.(((..........))).)))))))))))...)))))))))))....))))))...)))).

Structure

-    gaaua      gguaaag           -CG     U      u   uucu 
 aacc     agagga       cugAAGAGAGC   UCUAU GACAGU cgu    a
 ||||     ||||||       |||||||||||   ||||| |||||| |||     
 uugg     uuuccu       gaCUUCUCUCG   AGGUA CUGUca gua    u
u    --aac      ---agua           CUG     -      u   uuca 

Annotation confidence Not enough data

Genome context

Crem_Contig12: 1283899-1284006 [-]

Mature crm-miR-46-5p

• Accession: MIMAT0011597
• Description: Caenorhabditis remanei crm-miR-46-5p mature miRNA
• Sequence: 26 - AAGAGAGCCGUCUAUUGACAGU - 47
• Evidence: experimental ; 454 [1]

Mature crm-miR-46-3p

• Accession: MIMAT0011598
• Description: Caenorhabditis remanei crm-miR-46-3p mature miRNA
• Sequence: 68 - UGUCAUGGAGUCGCUCUCUUC - 88
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074