Stem-loop crm-mir-246-2

Accession

MI0011096

Description

Caenorhabditis remanei crm-mir-246-2 precursor miRNA

Gene family

MIPF0000260; mir-246

Sequence

aguccaaacaauagaacagcACCUGGCCGAUUUCAUGUAAUAUcugaaaagaaaagauaUUACAUGUAUCGGGUAGGAGcuguuugaguaaaggau
.((((........(((((((.((((.(((((..((((((((((((.........)))))))))))).))))).)))).))))))).......))))

Structure

a    aaacaaua       A    G     UU            gaa 
 gucc        gaacagc CCUG CCGAU  CAUGUAAUAUcu   a
 ||||        ||||||| |||| |||||  ||||||||||||   a
 uagg        uuugucG GGAU GGCUA  GUACAUUauaga   g
-    -aaaugag       A    G     -U            aaa 

Annotation confidence Not enough data

Genome context

Crem_Contig20: 644631-644726 [+]

Mature crm-miR-246-5p

• Accession: MIMAT0011571
• Description: Caenorhabditis remanei crm-miR-246-5p mature miRNA
• Sequence: 21 - ACCUGGCCGAUUUCAUGUAAUAU - 43
• Evidence: experimental ; 454 [1]

Mature crm-miR-246-3p

• Accession: MIMAT0011572
• Description: Caenorhabditis remanei crm-miR-246-3p mature miRNA
• Sequence: 60 - UUACAUGUAUCGGGUAGGAG - 79
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074