Stem-loop crm-mir-785

Accession

MI0011098

Description

Caenorhabditis remanei crm-mir-785 precursor miRNA

Gene family

MIPF0000896; mir-785

Sequence

gaaaccgcucuuuuuuguccgucagcgcagaauuuuuucgcuuacacgaguaauguaaacgaugUAAGUGAAUAUUCUGUGUCGauggguauaaaaagauaaugaugguuu
.((((((((((((((((((((((.(((((((((...((((((((((((...........)).)))))))))).))))))))).)))))))).)))))))....).))))))

Structure

g      - ----       -        a         uuu          -  agua 
 aaaccg c    ucuuuuu uguccguc gcgcagaau   uucgcuuaca cg    a
 |||||| |    ||||||| |||||||| |||||||||   |||||||||| ||    u
 uuuggu g    agaaaaa auggguaG UGUGUCUUA   AAGUGAAUgu gc    g
-      a uaau       u        C         --U          a  aaau 

Annotation confidence Not enough data

Genome context

Crem_Contig0: 4287759-4287869 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from crm-mir-785

Mature crm-miR-785

• Accession: MIMAT0011602
• Description: Caenorhabditis remanei crm-miR-785 mature miRNA
• Sequence: 65 - UAAGUGAAUAUUCUGUGUCG - 84
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074