Stem-loop crm-mir-35g

Accession

MI0011101

Description

Caenorhabditis remanei crm-mir-35g precursor miRNA

Sequence

auugcacuugacgacgggaaccgugcugauguugaccucggugauaggacugaaccguuacaagcuaUCACCGGGUGAACAUUGGUACUggucccuuagucaugauauugcgau
(((((((.((((...((((.(((((((((((((.(((.(((((((((.................)))))))))))).))))))))))).))))))...)))).)....))))))

Structure

      ---- u    gac    a  -           g   u         gacugaa 
auugca    c ugac   ggga cc gugcugauguu acc cggugauag       c
||||||    | ||||   |||| || ||||||||||| ||| |||||||||       c
uagcgu    g acug   cccu gg CAUGGUUACAA UGG GCCACUauc       g
      uaua u    auu    -  U           G   -         gaacauu 

Annotation confidence Not enough data

Genome context

Crem_Contig93: 222433-222546 [-]

Clustered miRNAs

15 other miRNAs are < 10 kb from crm-mir-35g

Mature crm-miR-35g

• Accession: MIMAT0011605
• Description: Caenorhabditis remanei crm-miR-35g mature miRNA
• Sequence: 68 - UCACCGGGUGAACAUUGGUACU - 89
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074