Stem-loop crm-mir-59

Accession

MI0011103

Description

Caenorhabditis remanei crm-mir-59 precursor miRNA

Literature search

1 open access papers mention crm-mir-59
(1 sentences)

Sequence

uguucccuugauucauagaugacaucguccugaaaacgaagcgaaacuaacaucagaagauaagauuUCGAAUCGUUUAUCAGGAUGAUGucauuauugaaacauucauuuuugguaaug
........((.((((..((((((((((((((((((((((..(((((((...(((....))).)).)))))..)))))).))))))))))))))))..)))).))................

Structure

--------uguucccu  a    ua                -      ag     -  aac   a 
                ug uuca  gaugacaucguccuga aaacga  cgaaa cu   auc g
                || ||||  |||||||||||||||| ||||||  ||||| ||   |||  
                ac aagu  uuacuGUAGUAGGACU UUUGCU  GCUuu ga   uag a
guaaugguuuuuacuu  a    ua                A      AA     a  --a   a 

Annotation confidence Low

Genome context

Crem_Contig20: 889052-889171 [-]

Mature crm-miR-59

• Accession: MIMAT0011606
• Description: Caenorhabditis remanei crm-miR-59 mature miRNA
• Sequence: 68 - UCGAAUCGUUUAUCAGGAUGAUG - 90
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074