Stem-loop crm-mir-259

Accession

MI0011104

Description

Caenorhabditis remanei crm-mir-259 precursor miRNA

Sequence

agccgacggaacgaguAAAUCUCAUCCUAAUCUGGUUGACacaacacaaggaagugcuaccgauuuggcuugggauugacuuguggaaauggcu
(((((.....((((((.(((((((.((.((((.(((.(.(((...........)))).))))))).))..))))))).)))))).....)))))

Structure

     acgga      A       -U  U    U   U A   aaca 
agccg     acgagu AAUCUCA  CC AAUC GGU G Cac    c
|||||     |||||| |||||||  || |||| ||| | |||    a
ucggu     uguuca uuagggu  gg uuag cca c gug    a
     aaagg      g       uc  u    -   u -   aagg 

Annotation confidence Low

Genome context

Crem_Contig60: 205404-205497 [-]

Mature crm-miR-259

• Accession: MIMAT0011607
• Description: Caenorhabditis remanei crm-miR-259 mature miRNA
• Sequence: 17 - AAAUCUCAUCCUAAUCUGGUUGAC - 40
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074