Stem-loop crm-mir-788

Accession

MI0011106

Description

Caenorhabditis remanei crm-mir-788 precursor miRNA

Gene family

MIPF0000974; mir-788

Sequence

ggccugaaacuuacgucUCCGCUUCUAACUUCCAUUUGCAGaguucaucaauucucuggaaauggauuagaaccgugaaauguuaguaugauggucc
(((((.(.(((.((((.((((.((((((..(((((((.(((((..........))))).))))))))))))).)).)).)))).))).).).)))).

Structure

-    - g a   u    c  -  C      CU       G     uuca 
 ggcc u a acu acgu UC CG UUCUAA  UCCAUUU CAGag    u
 |||| | | ||| |||| || || ||||||  ||||||| |||||     
 cugg a u uga ugua ag gc aagauu  agguaaa gucuc    c
c    u g a   u    a  u  c      --       g     uuaa 

Annotation confidence Not enough data

Genome context

Crem_Contig72: 198587-198683 [-]

Mature crm-miR-788

• Accession: MIMAT0011608
• Description: Caenorhabditis remanei crm-miR-788 mature miRNA
• Sequence: 18 - UCCGCUUCUAACUUCCAUUUGCAG - 41
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074