Stem-loop crm-mir-245

Accession

MI0011108

Description

Caenorhabditis remanei crm-mir-245 precursor miRNA

Gene family

MIPF0000257; mir-245

Sequence

aaaguacucaaugucgaagagcugcuugcaagguaccuaauuguuugcacauuucucaAUUGGUCCCCUCCAAGUAGCUCuauugcauuguuuguuuua
((((((..(((((.((((((((((((((...((.(((.(((((.............)))))))).))...))))))))))).))))))))..)))))).

Structure

-      cu     u   -           caa  u   u     uuugc 
 aaagua  caaug cga agagcugcuug   gg acc aauug     a
 ||||||  ||||| ||| |||||||||||   || ||| |||||     c
 uuuugu  guuac guu uCUCGAUGAAC   CC UGG UUAac     a
a      uu     -   a           CUC  C   -     ucuuu 

Annotation confidence Not enough data

Genome context

Crem_Contig143: 167381-167479 [+]

Mature crm-miR-245

• Accession: MIMAT0011610
• Description: Caenorhabditis remanei crm-miR-245 mature miRNA
• Sequence: 59 - AUUGGUCCCCUCCAAGUAGCUC - 80
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074