Stem-loop crm-mir-71

Accession

MI0011114

Description

Caenorhabditis remanei crm-mir-71 precursor miRNA

Gene family

MIPF0000278; mir-71

Sequence

cgugucuguaccaccaaacacucgaacgaUGAAAGACAUGGGUAGUGAGACGucggagccucgucgUAUCACUAUUCUGUUUUUCGCCggucuugugauauaccaugugucagauuuacg
(((((((((((.......(((..((.((.(((((((((.(((((((((.(((.(((....))).))).)))))))))))))))))).)).))..))).........))).)))))..)))

Structure

   --     -   --caccaaa   uc  a  a         U         G   u   a 
cgu  gucug uac         cac  ga cg UGAAAGACA GGGUAGUGA ACG cgg g
|||  ||||| |||         |||  || || ||||||||| ||||||||| ||| |||  
gca  uagac gug         gug  cu gC GCUUUUUGU CUUAUCACU Ugc gcu c
   uu     u   uaccauaua   uu  g  C         -         A   u   c 

Annotation confidence Not enough data

Genome context

Crem_Contig68: 372762-372881 [-]

Mature crm-miR-71-5p

• Accession: MIMAT0011618
• Description: Caenorhabditis remanei crm-miR-71-5p mature miRNA
• Sequence: 30 - UGAAAGACAUGGGUAGUGAGACG - 52
• Evidence: experimental ; 454 [1]

Mature crm-miR-71-3p

• Accession: MIMAT0011619
• Description: Caenorhabditis remanei crm-miR-71-3p mature miRNA
• Sequence: 67 - UAUCACUAUUCUGUUUUUCGCC - 88
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074