Stem-loop crm-mir-63

Accession

MI0011116

Description

Caenorhabditis remanei crm-mir-63 precursor miRNA

Gene family

MIPF0000823; mir-63

Sequence

uuccuccaacaugucagaaaacauccacuUCUAACUCGUCGGUAGUCAUUGUUuccauaaaccaggaagugaaacUAUGACACUGAAGCGAGUUAGaaauggugauucuguggcgaag
...(.(((......(((((..((.(((.(((((((((((((((.(((((.((((((............).))))).)))))))))..))))))))))).))))).)))))))).)...

Structure

uuc u   acaugu     aa  u   c           --    A     U     - auaaa 
   c cca      cagaa  ca cca uUCUAACUCGU  CGGU GUCAU GUUuc c     c
   | |||      |||||  || ||| |||||||||||  |||| ||||| ||||| |      
   g ggu      gucuu  gu ggu aaGAUUGAGCG  GUCA CAGUA caaag g     c
gaa c   ------     -a  -   a           AA    -     U     u aagga 

Annotation confidence Not enough data

Genome context

Crem_Contig50: 453664-453781 [+]

Mature crm-miR-63-5p

• Accession: MIMAT0011622
• Description: Caenorhabditis remanei crm-miR-63-5p mature miRNA
• Sequence: 30 - UCUAACUCGUCGGUAGUCAUUGUU - 53
• Evidence: experimental ; 454 [1]

Mature crm-miR-63-3p

• Accession: MIMAT0011623
• Description: Caenorhabditis remanei crm-miR-63-3p mature miRNA
• Sequence: 76 - UAUGACACUGAAGCGAGUUAG - 96
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074