Stem-loop crm-mir-2228

Accession

MI0011118

Description

Caenorhabditis remanei crm-mir-2228 precursor miRNA

Sequence

gaucggugaguugaauuccauuuuugugucuauuuuccgagcugcguugacugaaaagaauuucgagUCAUCCAUCUCUGAAAUUAGACacgaauugucggaguauguuuaugauuu
(((((.((((....(((((((.((((((((((.((((.(((.((.(.(((((((((....)))).))))).))).))).)))).))))))))))..)).)))))...))))))))).

Structure

-     g    uuga     -  -u          u    c   c  c u     -    a 
 gaucg ugag    auucc au  uuugugucua uuuc gag ug g ugacu gaaa g
 ||||| ||||    ||||| ||  |||||||||| |||| ||| || | ||||| ||||  
 uuagu auuu    ugagg ug  aagcaCAGAU AAAG CUC AC C ACUga cuuu a
u     -    -gua     c  uu          U    U   U  - U     g    a 

Annotation confidence Not enough data

Genome context

Crem_Contig74: 221632-221748 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from crm-mir-2228

Mature crm-miR-2228

• Accession: MIMAT0011625
• Description: Caenorhabditis remanei crm-miR-2228 mature miRNA
• Sequence: 68 - UCAUCCAUCUCUGAAAUUAGAC - 89
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074