Stem-loop crm-mir-2229

Accession

MI0011120

Description

Caenorhabditis remanei crm-mir-2229 precursor miRNA

Sequence

guuguuauauguucacaguucccacagggcuuuccacacucauugagaagcguUGAAAGACUGAUGGGUCCUGGGaacagauauuacaaca
(((((.((((((((.(((..(((((((..(((((.((.((........)).)).))))).))).))))..))).)))))..))).))))).

Structure

-     u   --     a   uu    -   gg     c  a  cau 
 guugu aua  uguuc cag  ccca cag  cuuuc ac cu   u
 ||||| |||  ||||| |||  |||| |||  ||||| || ||    
 caaca uau  acaaG GUC  GGGU GUC  GAAAG ug ga   g
a     u   ag     G   CU    A   -A     U  c  aga 

Annotation confidence Not enough data

Genome context

Crem_Contig0: 2910785-2910875 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from crm-mir-2229

Mature crm-miR-2229

• Accession: MIMAT0011627
• Description: Caenorhabditis remanei crm-miR-2229 mature miRNA
• Sequence: 54 - UGAAAGACUGAUGGGUCCUGGG - 75
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074