Accession
MI0011198
Description
Pristionchus pacificus
ppc-mir-54 precursor miRNA
Sequence
agguuagcuguauuccuucucuacugccguccgaguuauuucauucgggucuaccuauugagaggcuaAACCCGUAAUGAUAAUAAUUCGCGcggcuugaggacggaucagcgagucuug
(((...((((.((((.(((((....(((((.(((((((((((((((((((.(((((......))).)).))))).))))).))))))))).)))))..))))).))))))))....))).
(((...((((.((((.(((((....(((((.(((((((((((((((((((.(((((......))).)).))))).))))).))))))))).)))))..))))).))))))))....))).
Structure
- -uua u c uacu c - - c - au agg gcug auuc uucuc gccgu cgaguuauu ucauu cgggu ua ccu u ||| |||| |||| ||||| ||||| ||||||||| ||||| ||||| || ||| uuc cgac uagg aggag cggcG GCUUAAUAA AGUAA GCCCA au gga g g ugag - c --uu C U U A c ga
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
ABKE03000107.1: 3735128-3735247 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from ppc-mir-54
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppc-miR-54
| Accession | MIMAT0011695 |
| Description | Pristionchus pacificus ppc-miR-54 mature miRNA |
| Sequence | 69 - AACCCGUAAUGAUAAUAAUUCGCG - 92 |
| Evidence |
experimental
454 [1] |
References
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