Accession
MI0011205
Description
Pristionchus pacificus
ppc-mir-2237a precursor miRNA
Sequence
490400
reads,
35460.0
reads per million, 12 experiments
ggcaucugugccagaUACCCGUUGGUUUUCGGACAGUUcgugauugacagcgaaCCGUUCGGCGCUAUCGGGUGCCUGGcuaggauggcca
(((((((..(((((.((((((.((((..((((((.((((((........)))))).)))))).)))).)))))).)))))..)))).))).
(((((((..(((((.((((((.((((..((((((.((((((........)))))).)))))).)))).)))))).)))))..)))).))).
Structure
- - gu a U UU A gau ggc aucu gccag UACCCG UGGU UCGGAC GUUcgu u ||| |||| ||||| |||||| |||| |||||| |||||| ccg uagg cGGUC GUGGGC AUCG GGCUUG Caagcg g a g au C U -C C aca
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
ABKE03000024.1: 401313-401403 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from ppc-mir-2237a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppc-miR-2237a-5p
| Accession | MIMAT0011702 |
| Description | Pristionchus pacificus ppc-miR-2237a-5p mature miRNA |
| Sequence | 16 - UACCCGUUGGUUUUCGGACAGUU - 38 |
| Evidence |
experimental
454 [1] |
Mature ppc-miR-2237a-3p
| Accession | MIMAT0056955 |
| Description | Pristionchus pacificus ppc-miR-2237a-3p mature miRNA |
| Sequence | 55 - CCGUUCGGCGCUAUCGGGUGCCUGG - 79 |
| Evidence |
experimental
454 [1] |
References
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