Accession
MI0011211
Description
Pristionchus pacificus
ppc-mir-2242-2 precursor miRNA
Sequence
caagugacauagcugaugaacuuuguaguguccucacucgcucauuucauuccgacacaagaaaugugUUGGAAUGAAACGAGUGAGUCAGCaucaccgucuuuguaguguucaguug
(((.((((((.((.((((.........(((..((.((((((((.(((((((((((((((.....))))))))))))))).)))))))).))...)))))))...)).))).))).)))
(((.((((((.((.((((.........(((..((.((((((((.(((((((((((((((.....))))))))))))))).)))))))).))...)))))))...)).))).))).)))
Structure
g - a --u aacuuugua -uc c a a caa uga cau gc gaug gug cu acucgcuc uuucauuccgacaca g ||| ||| ||| || |||| ||| || |||||||| ||||||||||||||| a guu acu gug ug cugc cac GA UGAGUGAG AAAGUAAGGUUgugu a g u a uuu --------- uaC C C a
Annotation confidence
Low
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Genome context
ABKE03000104.1: 776047-776164 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ppc-mir-2242-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppc-miR-2242
| Accession | MIMAT0011707 |
| Description | Pristionchus pacificus ppc-miR-2242 mature miRNA |
| Sequence | 69 - UUGGAAUGAAACGAGUGAGUCAGC - 92 |
| Evidence |
experimental
454 [1] |
References
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