Accession
MI0011214
Description
Pristionchus pacificus
ppc-mir-2246 precursor miRNA
Sequence
732
reads,
86.0
reads per million, 12 experiments
cccuucgcccucagagucccgcUAUCACAAUAGUUUAGUUGCCGCauauaauggaagaugCCGCUCUAAACUGUUGUAAUACCgggcggaggaguuggga
(((..(..((((...(.((((.(((.((((((((((((..((.((((..........)))).)).)))))))))))).))).))))).)))).)..))).
(((..(..((((...(.((((.(((.((((((((((((..((.((((..........)))).)).)))))))))))).))).))))).)))).)..))).
Structure
- uu gc aga u c C UU C auaa ccc c ccuc g cccg UAU ACAAUAGUUUAG GC GCau u ||| | |||| | |||| ||| |||||||||||| || |||| ggg g ggag c gggC AUA UGUUGUCAAAUC CG Cgua g a uu -a --g - C A -U C gaag
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ABKE03000119.1: 316972-317071 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ppc-mir-2246
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppc-miR-2246-5p
| Accession | MIMAT0011711 |
| Description | Pristionchus pacificus ppc-miR-2246-5p mature miRNA |
| Sequence | 23 - UAUCACAAUAGUUUAGUUGCCGC - 45 |
| Evidence |
experimental
454 [1] |
Mature ppc-miR-2246-3p
| Accession | MIMAT0056959 |
| Description | Pristionchus pacificus ppc-miR-2246-3p mature miRNA |
| Sequence | 61 - CCGCUCUAAACUGUUGUAAUACC - 83 |
| Evidence |
experimental
454 [1] |
References
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