Accession
MI0011220
Description
Pristionchus pacificus
ppc-mir-55a precursor miRNA
Sequence
augcucacucugaggggaguugccacuaggcagcaaugcuaacgaguguguugaucuuucguaucaucucaUACCCGUAAGCCAUUCUGUCGAGcggcucucuccauuccgagugaggau
((.(((((((.((((((((..(((.((.(((((.((((((.(((.(((((.(((((....).))))...))))).))).)).))))))))).)).))).))))))..)).))))))).))
((.(((((((.((((((((..(((.((.(((((.((((((.(((.(((((.(((((....).))))...))))).))).)).))))))))).)).))).))))))..)).))))))).))
Structure
g u -- uu a a c - a a --u - u au cucacuc ga ggggag gcc cu ggcag aaug cu acg gugug ugau c u || ||||||| || |||||| ||| || ||||| |||| || ||| ||||| |||| | ua gagugag cu ccucuc cgg GA CUGUC UUAC GA UGC CAUac acua g u g c ua -u c G - C A C ucu u c
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
ABKE03000094.1: 1044747-1044866 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ppc-mir-55a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppc-miR-55a
| Accession | MIMAT0011716 |
| Description | Pristionchus pacificus ppc-miR-55a mature miRNA |
| Sequence | 72 - UACCCGUAAGCCAUUCUGUCGAG - 94 |
| Evidence |
experimental
454 [1] |
References
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