Accession
MI0011225
Description
Pristionchus pacificus
ppc-mir-2251a precursor miRNA
Sequence
4963
reads,
286.0
reads per million, 12 experiments
gcccgcuacucgacacgucccaaAUCCUCAUGAAUCCCGGUUUUGAUCacuaguugcagugaUCACCGGGAUUCUAUGAAGAUCUgggcuucgagaaggc
....(((.(((((...(.((((.(((.((((((((((((((...(((((((......))))))))))))))))).)))).))).))))).)))))..)))
....(((.(((((...(.((((.(((.((((((((((((((...(((((((......))))))))))))))))).)))).))).))))).)))))..)))
Structure
gccc -a cac u a C - UUU ag
gcu cucga g ccca AUC UCAU GAAUCCCGGU GAUCacu u
||| ||||| | |||| ||| |||| |||||||||| |||||||
cgg gagcu c gggU UAG AGUA CUUAGGGCCA CUaguga u
---- aa --u - C A U --- cg
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ABKE03000093.1: 9033595-9033694 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ppc-mir-2251a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppc-miR-2251a-5p
| Accession | MIMAT0056966 |
| Description | Pristionchus pacificus ppc-miR-2251a-5p mature miRNA |
| Sequence | 24 - AUCCUCAUGAAUCCCGGUUUUGAUC - 48 |
| Evidence |
experimental
454 [1] |
Mature ppc-miR-2251a-3p
| Accession | MIMAT0011720 |
| Description | Pristionchus pacificus ppc-miR-2251a-3p mature miRNA |
| Sequence | 63 - UCACCGGGAUUCUAUGAAGAUCU - 85 |
| Evidence |
experimental
454 [1] |
References
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