Stem-loop ppc-mir-2269

Accession

MI0011229

Description

Pristionchus pacificus ppc-mir-2269 precursor miRNA

Sequence

cuuggcaggugagaguguguugugaugcaccugaaggUGAUUCAGAGCACAUUCUCAGaacgcccaacuuugccga
.(((((((((.((.((((((....)))))))).).((((.....................))))....))))))))

Structure

c        ugagaguguguugugaugcaccugaa    AUUCAGAGC 
 uuggcagg                          ggUG         A
 ||||||||                          ||||         C
 agccguuu                          ccgc         A
-        ----------------------caac    aaGACUCUU 

Annotation confidence Low

Genome context

ABKE03000094.1: 1114611-1114686 [+]

Mature ppc-miR-2269

• Accession: MIMAT0011724
• Description: Pristionchus pacificus ppc-miR-2269 mature miRNA
• Sequence: 38 - UGAUUCAGAGCACAUUCUCAG - 58
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074