Stem-loop zma-MIR2118a

Accession

MI0011271

Description

Zea mays zma-MIR2118a precursor miRNA

Literature search

11 open access papers mention zma-MIR2118a
(13 sentences)

Sequence

50 reads, 971 reads per million, 12 experiments

ccuaagggcaguagggaugagaacaugaaggaacgcgagugcucugaauuucucgucucgcacggaggacaugugcacugucgugUUCCUGAUGCCUCUCAUUCCUAugguucuuagg
(((((((((.((((((((((((.(((..((((((((((((((.(((...(((((..........))))))).).))))..)))))))))).)))..)))))))))))).)))))))))

Structure

         a            -a   ga          --    u -  aau     gucu 
ccuaagggc guagggaugaga  cau  aggaacgcga  gugc c ug   uucuc    c
||||||||| ||||||||||||  |||  ||||||||||  |||| | ||   |||||     
ggauucuug uAUCCUUACUCU  GUA  UCCUUgugcu  cacg g ac   aggag    g
         g            CC   -G          gu    u u  ---     gcac 

Annotation confidence Not enough data

Genome context

chr10: 118790595-118790712 [-]

Mature zma-miR2118a

• Accession: MIMAT0011760
• Description: Zea mays zma-miR2118a mature miRNA
• Sequence: 86 - UUCCUGAUGCCUCUCAUUCCUA - 107
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19584097
   Clusters and superclusters of phased small RNAs in the developing inflorescence of rice
   "Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH"
   "Genome Res (2009) 19:1429-1440