Stem-loop dme-mir-2281

Accession

MI0011291

Description

Drosophila melanogaster dme-mir-2281 precursor miRNA

Sequence

12 reads, 3 reads per million, 4 experiments

ggaugucgagcaguacacguAUUAUCUGCAGCUGCAGAUGCAAauguauauguaucugUAUCUGUAUCUGCAGUAUUGCaguaucgcugcuuuauucauaucc
((((((.(((((((..(((((.((.((((((.((((((((((.(((......))).)))))))))).)))))))).))).))...))))))).....))))))

Structure

      ----c       -ac  -   U  U      C          A   ua 
ggaugu     gagcagu   ac guA UA CUGCAG UGCAGAUGCA aug  u
||||||     |||||||   || ||| || |||||| |||||||||| |||   
ccuaua     uucgucg   ug CGU AU GACGUC AUGUCUAUgu uau  a
      cuuau       cua  a   U  -      U          c   gu 

Annotation confidence Not enough data

Genome context

chr3R: 14396399-14396501 [-]

Mature dme-miR-2281-5p

• Accession: MIMAT0011788
• Description: Drosophila melanogaster dme-miR-2281-5p mature miRNA
• Sequence: 21 - AUUAUCUGCAGCUGCAGAUGCAA - 43
• Evidence: experimental ; 454 [1]

Mature dme-miR-2281-3p

• Accession: MIMAT0011789
• Description: Drosophila melanogaster dme-miR-2281-3p mature miRNA
• Sequence: 59 - UAUCUGUAUCUGCAGUAUUGC - 79
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19541914
   Abundant primary piRNAs, endo-siRNAs, and microRNAs in a Drosophila ovary cell line
   "Lau NC, Robine N, Martin R, Chung WJ, Niki Y, Berezikov E, Lai EC"
   "Genome Res (2009) 19:1776-1785