Stem-loop dme-mir-2282

Accession

MI0011292

Description

Drosophila melanogaster dme-mir-2282 precursor miRNA

Sequence

35 reads, 6 reads per million, 18 experiments

gccugcauaacgcuguggcuuuccgcuucuauuuuucguucacugccuugugcuucguuggaaaAUCGGUGAGCUAAAAAUAGAAUucgguugccacgcuucaaggg
.(((.......((.(((((...(((.((((((((((.((((((((.....(.(......).)....)))))))).))))))))))..)))..)))))))....))).

Structure

g   gcauaac  u     uuu   -c          c        ccuug g uu 
 ccu       gc guggc   ccg  uucuauuuuu guucacug     u c  c
 |||       || |||||   |||  |||||||||| ||||||||     | |   
 gga       cg caccg   ggc  AAGAUAAAAA CGAGUGGC     a g  g
g   ---acuu  -     -uu   uU          U        -UAaa g uu 

Annotation confidence Not enough data

Genome context

chr3L: 3412145-3412251 [-]

Mature dme-miR-2282-3p

• Accession: MIMAT0011790
• Description: Drosophila melanogaster dme-miR-2282-3p mature miRNA
• Sequence: 65 - AUCGGUGAGCUAAAAAUAGAAU - 86
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19541914
   Abundant primary piRNAs, endo-siRNAs, and microRNAs in a Drosophila ovary cell line
   "Lau NC, Robine N, Martin R, Chung WJ, Niki Y, Berezikov E, Lai EC"
   "Genome Res (2009) 19:1776-1785