Stem-loop bdi-MIR399a

Accession

MI0011572

Description

Brachypodium distachyon bdi-MIR399a precursor miRNA

Literature search

3 open access papers mention bdi-MIR399a
(10 sentences)

Sequence

cagugcaguucuccucuggcauggaugcuaauguagcaggcccugcacaauggacuaugcuaucacugucccUGCCAAAGGAGAAUUACCCUGccagugc
(((.(.(((((((((.(((((.((((......((((((((.((........)).)).))))))....)))).))))).))))))))).).))).......

Structure

-------   u c         c     u    gcuaau      -  c  ugc 
       cag g aguucuccu uggca ggau      guagca gg cc   a
       ||| | ||||||||| ||||| ||||      |||||| || ||    
       GUC C UUAAGAGGA ACCGU ccug      uaucgu uc gg   c
cgugacc   C A         A     c    --ucac      a  a  uaa 

Annotation confidence Not enough data

Genome context

1: 34375795-34375894 [-]

Mature bdi-miR399a

• Accession: MIMAT0012187
• Description: Brachypodium distachyon bdi-miR399a mature miRNA
• Sequence: 73 - UGCCAAAGGAGAAUUACCCUG - 93
• Evidence: not_experimental

References

1. PubMed ID: 19585143
   Conserved microRNAs and their targets in model grass species Brachypodium distachyon
   "Unver T, Budak H"
   "Planta (2009) 230:659-669