Stem-loop dme-mir-2500

Accession

MI0011589

Description

Drosophila melanogaster dme-mir-2500 precursor miRNA

Sequence

235 reads, 49 reads per million, 39 experiments

GUAAGGAACACACAUAUACAAUACCguuugaauuucaaauaaucaGGAUUUUGUGUGUGGACCUCAGa
...(((..((((((((...(((.((((((((...)))))).....))))).))))))))..)))....

Structure

-GUA   AA        UAC   A  -----      a 
    AGG  CACACAUA   AAU CC     guuuga  
    |||  ||||||||   ||| ||     |||||| u
    UCC  GUGUGUGU   UUA GG     uaaacu  
aGAC   AG        --U   -  acuaa      u 

Annotation confidence Not enough data

Genome context

chr3L: 16998457-16998524 [-]

Mature dme-miR-2500-5p

• Accession: MIMAT0012214
• Description: Drosophila melanogaster dme-miR-2500-5p mature miRNA
• Sequence: 1 - GUAAGGAACACACAUAUACAAUACC - 25
• Evidence: experimental ; Illumina [1]

Mature dme-miR-2500-3p

• Accession: MIMAT0012215
• Description: Drosophila melanogaster dme-miR-2500-3p mature miRNA
• Sequence: 46 - GGAUUUUGUGUGUGGACCUCAG - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9