Stem-loop dsi-mir-993

Accession

MI0011749

Description

Drosophila simulans dsi-mir-993 precursor miRNA

Sequence

cucccgugacCUACCCUGUAGUUCCGGGCUUUUGuuuaaauggcguucggcgcauugucggauugcuggcucgauuaucaGAAGCUCGUCUCUACAGGUAUCUcacaggguaga
(((((((((..((((.(((((...((((((((((......(((((((((((.....)))))).)))))..........))))))))))...)))))))))..)))).))).)).

Structure

-  -   -    cC    C     UUC          ----uuuaaa     -      g 
 cu ccc guga  UACC UGUAG   CGGGCUUUUG          uggcg uucggc c
 || ||| ||||  |||| |||||   ||||||||||          ||||| |||||| a
 ga ggg cacU  AUGG ACAUC   GCUCGAAGac          gucgu aggcug u
a  u   a    CU    -     UCU          uauuagcucg     u      u 

Annotation confidence Not enough data

Genome context

chr3R: 2632935-2633048 [+]

Mature dsi-miR-993-5p

• Accession: MIMAT0012461
• Description: Drosophila simulans dsi-miR-993-5p mature miRNA
• Sequence: 11 - CUACCCUGUAGUUCCGGGCUUUUG - 34
• Evidence: experimental ; Illumina [1]

Mature dsi-miR-993-3p

• Accession: MIMAT0012462
• Description: Drosophila simulans dsi-miR-993-3p mature miRNA
• Sequence: 81 - GAAGCUCGUCUCUACAGGUAUCU - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9