Stem-loop dsi-mir-1005

Accession

MI0011752

Description

Drosophila simulans dsi-mir-1005 precursor miRNA

Sequence

uucacggccaugaugccuaccauucugaccuGUGAGUUGAUCGAUUUCGAGUUuuuggccacaaauauaaUCUGGAAUCUUUAAUUCGCAGuucccaccgaaaugucaguguucgugagg
(((((((.((((((............((.(((((((((((..((((((((...((((....)))).....)).)))))).))))))))))).))..........)))).)).))))))).

Structure

-       c  -    gccuaccauucu  c           UC      -  --GUU    g 
 uucacgg ca ugau            ga cuGUGAGUUGA  GAUUUC GA     uuug c
 ||||||| || ||||            || |||||||||||  |||||| ||     ||||  
 gagugcu gu acug            cu GACGCUUAAUU  CUAAGG CU     aaac c
g       u  g    --uaaagccacc  u           -U      U  aauau    a 

Annotation confidence Not enough data

Genome context

chr2L: 4265528-4265647 [+]

Mature dsi-miR-1005-5p

• Accession: MIMAT0012467
• Description: Drosophila simulans dsi-miR-1005-5p mature miRNA
• Sequence: 32 - GUGAGUUGAUCGAUUUCGAGUU - 53
• Evidence: experimental ; Illumina [1]

Mature dsi-miR-1005-3p

• Accession: MIMAT0012468
• Description: Drosophila simulans dsi-miR-1005-3p mature miRNA
• Sequence: 71 - UCUGGAAUCUUUAAUUCGCAG - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9